PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000719421
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 91aa    MW: 10059.4 Da    PI: 8.2357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000719421genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.6e-171162155
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaee 55
                   lppGfrFhP+deelv++yL kkv++++ +l   + evd++k+ePwd+p kv+  e
  MDP0000719421 11 LPPGFRFHPRDEELVCDYLMKKVTQSDSTL---MIEVDLNKCEPWDIPGKVQRAE 62
                   79***********************99666...889************7665543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-17262IPR003441NAC domain
PROSITE profilePS5100517.851190IPR003441NAC domain
PfamPF023654.0E-81252IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSNISMVEAN LPPGFRFHPR DEELVCDYLM KKVTQSDSTL MIEVDLNKCE PWDIPGKVQR  60
AENSSKTVSN RGLGQMARGP HGTKNGQRAN *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF1981232e-56KF198123.1 Malus hupehensis NAC domain protein (NAC88) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009336675.19e-34PREDICTED: NAC domain-containing protein 21/22-like
RefseqXP_009361751.19e-34PREDICTED: NAC domain-containing protein 21/22-like
SwissprotQ84TE62e-22NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLF6KIF11e-30F6KIF1_MEDTR; NAC transcription factor-like protein
TrEMBLW0C8Y81e-30W0C8Y8_9FABA; NAC domain-containing protein
STRINGPOPTR_0007s08430.18e-31(Populus trichocarpa)
STRINGGLYMA15G40510.11e-28(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2190434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.13e-26NAC family protein